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Cool genetics tools to play with
  • A collection of tools that help us understand plants
  • Cross Species Related Apps
    • WebApp - Tree of life
    • WebApp - OrthoVenn3
    • WebApp: Flux Estimator for CORN ID's
    • Shiny - Coexpression enhances cross-species integration of single-cell RNA sequencing across diverse
    • Single cell Plant database
  • Multi Gene List Enrichment Analysis Tools
    • WebApp - g:Profiler
    • WebApp - Metascape
    • WebApp - Enrichr
    • WebApp: Plant reactome pathway browser
    • Root cell atlas
  • Integrated RNAseq analysis applications
    • Shiny App - DEVEA
    • iDEP.96
  • Mult-omic intergration
    • IntLIM 2.0: identifying multi-omic relationships dependent on discrete or continuous phenotypic meas
    • CAVE
    • ChIPHub
    • sRNAbench
  • Stress Knowledge Map!
  • Knetminer
  • GAIA
  • Create a chatbot to help guide paper writing for OSDR AWG.
  • NASA Science Discovery Engine
  • Langflow (Make your own AI / chat bot)
  • WebApp - Area proportional venn
  • EDGE Bioinformatics for metatranscriptomics.
  • Scholar. AI
  • Alpha fold original or new synthesis
  • Time-series single cell transcriptomic atlas for Arabidopsis de-etiolating seedlings.
  • Many systems biology tools in this portal
  • Shiny Nutrition calculator
  • Scholar tool Researchrabbit.ai
  • Plant connectome
  • Microbiome analysis tools in the cloud
  • habitat-lab
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Mult-omic intergration

PreviousiDEP.96NextIntLIM 2.0: identifying multi-omic relationships dependent on discrete or continuous phenotypic meas
IntLIM 2.0: identifying multi-omic relationships dependent on discrete or continuous phenotypic meas
CAVE
ChIPHub
sRNAbench